Welcome to chess-hic’s documentation!¶
- Getting started with chess-hic
- The chess-hic command line tool
- FAQ
- Why is
chess sim
so slow? - Why do I get “ERROR No valid region pairs found” when using Juicer .hic files?
- Can I use CHESS to compare the results of loop calling software between samples?
- I used the SSIM Z-score and SN thresholds from the CHESS paper. Why don’t I see any differences?
- How do I choose an appropriate SSIM / SN threshold for my data?
- What if I don’t have biological replicates?
- Why is