chess-hic
stable
Getting started with chess-hic
The chess-hic command line tool
FAQ
chess-hic
Docs
»
Welcome to chess-hic’s documentation!
Edit on GitHub
Welcome to chess-hic’s documentation!
¶
Getting started with chess-hic
Overview
Installation
Prerequisites
Installation from the Python Package Index (PyPi)
Installation from source
Example analysis
Finding differences between samples of different conditions
The chess-hic command line tool
chess
pairs
Positional Arguments
Named Arguments
chess
sim
Positional Arguments
Named Arguments
chess
extract
Positional Arguments
Named Arguments
chess
crosscorrelate
Positional Arguments
FAQ
Why is
chess
sim
so slow?
Why do I get “ERROR No valid region pairs found” when using Juicer .hic files?
Can I use CHESS to compare the results of loop calling software between samples?
Indices and tables
¶
Index
Module Index
Search Page
Read the Docs
v: stable
Versions
latest
stable
Downloads
On Read the Docs
Project Home
Builds
Free document hosting provided by
Read the Docs
.